SoyKB: Soybean Knowledge Base - Soybean Genomic Variations Explorer -

Soybean Genomic Variations Explorer

Promoter Search
Search By Gene IDs Gene IDs: (eg Glyma.01G049100 Glyma.01G049200 Glyma.01G049300) Upstream length (bp): (eg 2000)	Search By Binding TFs Binding TFs: (eg Glyma.01G005500 Glyma.01G022500 Glyma.01G023500) Gene Binding Chromosome: Upstream length (bp): (eg 2000)

Copy Number Variation Search
Search by Gene IDs Gene IDs: (eg Glyma.01G000100 Glyma.02G001700 Glyma.03G018100) Data Option:	Search By Accession and Copy Numbers Accession: (eg PI_479752) Copy Numbers: (eg CN0 CN1 CN2 CN3 CN4 CN5 CN6 CN7 CN8) Data Option:
Search By Chromosome and Region Chromosome: (eg Chr01) Starting Position: (eg 41175001) Ending Position: (eg 41775000) Data Option:

If you use the Soybean Genomic Variations Explorer in your work, please cite:

Chan YO, Biova J, Mahmood A, Dietz N, Bilyeu K, Škrabišová M, Joshi T: Genomic Variations Explorer (GenVarX): A Toolset for Annotating Promoter and CNV Regions Using Genotypic and Phenotypic Differences. Frontiers in Genetics 2023, In Press.

Promoter Search

Search By Gene IDs

Search By Binding TFs

Copy Number Variation Search

Search by Gene IDs

Search By Accession and Copy Numbers

Search By Chromosome and Region

If you use the Soybean Genomic Variations Explorer in your work, please cite: